LAMMPS (28 Mar 2023 - Development)
  using 1 OpenMP thread(s) per MPI task
# 2d polygon nparticle bodies

units		lj
dimension       2
atom_style	body nparticle 2 6

read_data       data.body
Reading data file ...
  orthogonal box = (-15.532225 -15.532225 -0.5) to (15.532225 15.532225 0.5)
  1 by 1 by 1 MPI processor grid
  reading atoms ...
  100 atoms
  100 bodies
  read_data CPU = 0.002 seconds

velocity	all create 1.44 87287 loop geom

pair_style	body/nparticle 5.0
pair_coeff	* * 1.0 1.0

neighbor	0.5 bin
neigh_modify    every 1 delay 0 check yes

fix		1 all nve/body
#fix		1 all nvt/body temp 1.44 1.44 1.0
fix		2 all enforce2d

#compute         1 all body/local type 1 2 3
#dump            1 all local 100 dump.body index c_1[1] c_1[2] c_1[3] c_1[4]

#dump		2 all image 1000 image.*.jpg type type #		zoom 1.6 adiam 1.5 body type 1.0 0
#dump_modify    2 pad 5

thermo          100
run		10000
Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule
Neighbor list info ...
  update: every = 1 steps, delay = 0 steps, check = yes
  max neighbors/atom: 2000, page size: 100000
  master list distance cutoff = 5.5
  ghost atom cutoff = 5.5
  binsize = 2.75, bins = 12 12 1
  1 neighbor lists, perpetual/occasional/extra = 1 0 0
  (1) pair body/nparticle, perpetual
      attributes: half, newton on
      pair build: half/bin/atomonly/newton
      stencil: half/bin/2d
      bin: standard
Per MPI rank memory allocation (min/avg/max) = 5.279 | 5.279 | 5.279 Mbytes
   Step          Temp          E_pair         E_mol          TotEng         Press     
         0   1.44          -0.63799525     0              0.78760475    -0.15028724   
       100   1.6423694     -1.0001516      0              0.62579417     0.16116443   
       200   1.4802187     -1.2479519      0              0.21746458     0.35445329   
       300   1.4734223     -1.3213583      0              0.1373298      0.45266192   
       400   1.5118818     -1.5924889      0             -0.095725867    0.13296961   
       500   1.5471951     -1.630886       0             -0.099162814    0.12439793   
       600   1.6264248     -1.6468162      0             -0.03665568     0.43392484   
       700   1.597475      -1.6539821      0             -0.072481849    0.13128147   
       800   1.6841531     -1.775776       0             -0.10846445    -0.032960346  
       900   1.556262      -1.6750139      0             -0.1343146      0.53484605   
      1000   1.6272373     -1.7572956      0             -0.14633067     0.18431831   
      1100   1.6448235     -1.7176556      0             -0.089280316    0.25900065   
      1200   1.5486928     -1.6481004      0             -0.11489454     0.036934194  
      1300   1.7449183     -1.6039068      0              0.12356231    -0.071099427  
      1400   1.668581      -1.5939776      0              0.057917584    0.02239666   
      1500   1.6514223     -1.7086624      0             -0.073754397    0.39021328   
      1600   1.8367415     -1.808017       0              0.010357066    0.1405097    
      1700   1.6439993     -1.7711084      0             -0.14354908     0.37488252   
      1800   1.8105437     -1.7312044      0              0.061233893    0.033817829  
      1900   1.7745557     -1.7184539      0              0.038356243    0.26826112   
      2000   1.4919032     -1.7635799      0             -0.28659575     0.32901186   
      2100   1.5086111     -1.5151192      0             -0.021594146    0.37082072   
      2200   1.4464813     -1.5702682      0             -0.13825163    -0.043079808  
      2300   1.398236      -1.5359564      0             -0.15170277     0.14467017   
      2400   1.5050139     -1.6002694      0             -0.11030569     0.30358205   
      2500   1.5549789     -1.652805       0             -0.11337589     0.2916046    
      2600   1.4774593     -1.5406116      0             -0.077926888    0.020921323  
      2700   1.3700851     -1.5855698      0             -0.22918557     0.22226615   
      2800   1.4656869     -1.629742       0             -0.17871195    -0.0090503155 
      2900   1.4355808     -1.6486992      0             -0.22747424     0.12741636   
      3000   1.5859288     -1.5467092      0              0.023360382    0.23081334   
      3100   1.6099287     -1.4917881      0              0.10204129     0.22085916   
      3200   1.6814814     -1.554998       0              0.10966853     0.10312492   
      3300   1.5319494     -1.4723195      0              0.044310484    0.18583117   
      3400   1.5124418     -1.499312       0             -0.0019945387   0.15564425   
      3500   1.6106798     -1.5568215      0              0.037751529    0.27433785   
      3600   1.460087      -1.5530078      0             -0.10752165     0.0073889211 
      3700   1.5744452     -1.5720821      0             -0.013381308    0.27735962   
      3800   1.7290106     -1.6504739      0              0.061246632    0.48173619   
      3900   1.611197      -1.6452216      0             -0.05013663     0.4286963    
      4000   1.6715425     -1.6409258      0              0.013901267    0.017020657  
      4100   1.6913694     -1.5885259      0              0.085929717    0.13679669   
      4200   1.5347633     -1.6316222      0             -0.11220653     0.024396005  
      4300   1.5221369     -1.5924627      0             -0.085547139    0.29634927   
      4400   1.7020273     -1.7069204      0             -0.021913362    0.12700619   
      4500   1.7176336     -1.7439335      0             -0.043476251    0.14745343   
      4600   1.4409943     -1.6121558      0             -0.18557152     0.018887675  
      4700   1.7868207     -1.6707762      0              0.098176247    0.20004565   
      4800   1.8720226     -1.7000206      0              0.15328178     0.25661867   
      4900   1.7128343     -1.7289913      0             -0.033285317    0.24698662   
      5000   1.7242114     -1.6662075      0              0.040761785    0.18935677   
      5100   1.7589418     -1.7267393      0              0.014613086    0.40918365   
      5200   1.7138074     -1.778402       0             -0.081732715    0.39679805   
      5300   1.8149032     -1.7708654      0              0.025888786    0.29874434   
      5400   1.7140097     -1.6444743      0              0.052395323    0.62588743   
      5500   1.8076873     -1.7276245      0              0.061985946    0.25434646   
      5600   1.7137948     -1.678778       0              0.017878859    0.21062182   
      5700   1.8625614     -1.7114074      0              0.1325284      0.14365823   
      5800   1.667941      -1.6462142      0              0.0050473638   0.36134037   
      5900   1.7080521     -1.6919526      0             -0.00098107526  0.27472252   
      6000   1.7180315     -1.6677683      0              0.033082909    0.29905397   
      6100   1.8264687     -1.6837934      0              0.12441065     0.033504487  
      6200   1.757998      -1.634503       0              0.10591508     0.14360478   
      6300   1.6444838     -1.5734502      0              0.05458881     0.50314779   
      6400   1.7213235     -1.705482       0             -0.0013717454  -0.063375271  
      6500   1.5454026     -1.7236013      0             -0.19365272     0.21355367   
      6600   1.7550617     -1.7304462      0              0.0070648556   0.1782743    
      6700   1.6931304     -1.7005361      0             -0.024337029    0.31165135   
      6800   1.7953505     -1.7377126      0              0.039684354    0.27052592   
      6900   1.6547086     -1.6971987      0             -0.059037125    0.26390513   
      7000   1.678321      -1.6343689      0              0.027168906    0.23632145   
      7100   1.6389472     -1.690589       0             -0.068031265    0.26471258   
      7200   1.6772509     -1.7305397      0             -0.070061301    0.16013956   
      7300   1.7401473     -1.7461921      0             -0.023446315    0.14462402   
      7400   1.7381776     -1.6586839      0              0.06211186     0.47746891   
      7500   1.7184021     -1.8309755      0             -0.1297574      0.27706616   
      7600   1.8404039     -1.7957552      0              0.026244663    0.12898128   
      7700   1.8474196     -1.7118818      0              0.11706359     0.1959609    
      7800   1.7635506     -1.6119363      0              0.1339788      0.086260229  
      7900   1.5873929     -1.5651473      0              0.0063716922   0.0010935251 
      8000   1.6394989     -1.5900851      0              0.033018817    0.41301427   
      8100   1.6731865     -1.6981463      0             -0.041691712    0.46624156   
      8200   1.7728067     -1.7515658      0              0.0035128109   0.16520115   
      8300   1.6142221     -1.8030321      0             -0.20495225     0.039485737  
      8400   1.6775678     -1.8266472      0             -0.16585509     0.074514313  
      8500   1.8399403     -1.8100014      0              0.011539538    0.38126754   
      8600   1.8259529     -1.6641902      0              0.14350318     0.80219793   
      8700   1.8454807     -1.68448        0              0.14254593     0.18855669   
      8800   1.7017088     -1.7219601      0             -0.037268433    0.36465692   
      8900   1.612135      -1.5813013      0              0.014712431    0.21657263   
      9000   1.5992353     -1.7093785      0             -0.12613559     0.038933966  
      9100   1.7486466     -1.7024749      0              0.028685202    0.28688996   
      9200   1.546781      -1.6512407      0             -0.1199275      0.16188207   
      9300   1.8424683     -1.7304781      0              0.093565478    0.35295164   
      9400   1.7646311     -1.7795324      0             -0.032547636    0.39114207   
      9500   1.8061763     -1.8458669      0             -0.057752329    0.18930255   
      9600   1.6953348     -1.7144901      0             -0.036108734    0.18392219   
      9700   1.693168      -1.5860306      0              0.090205689    0.18749665   
      9800   1.6057784     -1.6478049      0             -0.05808426     0.28339031   
      9900   1.712654      -1.6566387      0              0.038888773    0.52108885   
     10000   1.7102385     -1.6670768      0              0.026059337    0.073458218  
Loop time of 1.09582 on 1 procs for 10000 steps with 100 atoms

Performance: 3942257.351 tau/day, 9125.596 timesteps/s, 912.560 katom-step/s
99.8% CPU use with 1 MPI tasks x 1 OpenMP threads

MPI task timing breakdown:
Section |  min time  |  avg time  |  max time  |%varavg| %total
---------------------------------------------------------------
Pair    | 0.95651    | 0.95651    | 0.95651    |   0.0 | 87.29
Neigh   | 0.0064365  | 0.0064365  | 0.0064365  |   0.0 |  0.59
Comm    | 0.015238   | 0.015238   | 0.015238   |   0.0 |  1.39
Output  | 0.00059554 | 0.00059554 | 0.00059554 |   0.0 |  0.05
Modify  | 0.10993    | 0.10993    | 0.10993    |   0.0 | 10.03
Other   |            | 0.007113   |            |       |  0.65

Nlocal:            100 ave         100 max         100 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Nghost:             80 ave          80 max          80 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Neighs:            448 ave         448 max         448 min
Histogram: 1 0 0 0 0 0 0 0 0 0

Total # of neighbors = 448
Ave neighs/atom = 4.48
Neighbor list builds = 463
Dangerous builds = 0
Total wall time: 0:00:01
